Purpose | Magnetic silica beads with optimized magnetic content for fast separation and long suspension time without mixing. Intended for nucleic acid isolation from various sources (blood, cells, bacteria etc.) for manual and automated work-flow Under specific conditions, the carboxylated surface enables higher yield and purity from samples. |
Sample Type | Blood, Cell Lysate |
Characteristics | Coating chemistry: Carboxyl |
Components | Magnetic silica beads with high magnetic content. Optimized for nucleic acid isolation |
Material not included |
Depending on the application, reagents, equipment and consumables are needed: A specific set of binding, washing and elution buffers for the intended application Magnetic Separator for collection of the beads Mixer/vortexer for homogenization of the beads and sample mixture Optionally, a suspension buffer for preparation of the beads Container tubes or deep-well microplates and pipette tips |
ProductDetails: Bead Ligand | Carboxyl modified surface |
ProductDetails: Bead Matrix | Magnetic Silica particles |
ProductDetails: Bead Size | Bead size: 1.2 μm |
Comment |
MagSi-DNA allround beads reversibly bind DNA and other nucleic acids under sample- and buffer-specific conditions. They can be used to isolate and purify nucleic acids from various (complex) mixtures, such as cell lysates, or enzymatic reactions. It works as following: |
Protocol |
MagSi-DNA allround beads are ideal for purification or isolation of nucleic acids from various sources. The magnetic microparticles are intended as a solid phase extraction tool for custom buffer systems based on chaotropic as well non-chaotropic binding principles, and can be used for developing your own nucleic acid isolation and extraction methods, such as: Isolation of genomic, mitochondrial, or viral DNA from whole blood, cell lysates, human, animal, or plant tissue, isolation of RNA Isolation of genomic, plasmid, cosmid, or phage DNA from bacterial cultures and bacteria from clinical samples (blood, stool, swabs, etc.) Cleanup of DNA from enzymatic reactions (restriction digestions, ligations) or chromatin immunoprecipitation (ChIP) procedures to get rid of excess primers, nucleotides, enzymes, salts, buffers and other substances that are unwanted in downstream applications MagSi-DNA allround beads are magnetic silica beads with a nano-porous surface optimal for nucleic acid binding.Thanks to their superparamagnetic properties, the beads sediment very slowly and typically collect within 3 minutes in a magnetic field. This makes them applicable for both manual and automated/robotic DNA isolation. Carboxylated and Non-Carboxylated MagSi-DNA allround beads: Optimal binding conditions differ for beads with silica or with carboxyl surfaces. In Table 1 below, some of the practical differences between the 2 types of beads are shown. (To develop a new application it is recommended to try both types in parallel!) Plain silica MagSi-DNA allround - Compatability with chaotropic / high salt binding buffers: Fully compatible - Binding mechanism: Dehydration of nucleic acids / hydrogen bonding - Elution mechanism (conditions): Low salt conditions ? rehydration of DNA Carboxylated MagSi-DNA allround COOH - Compatability with chaotropic / high salt binding buffers: Partially compatible - Binding mechanism: Binding supported by alcohols, polymers like PEG and divalent salts (e.g. Mg2+) - Elution mechanism (conditions): pH shift from acidic binding towards basic elution conditions Or low salt conditions ? change repulsion |
Reagent Preparation |
MagSi-DNA (COOH) beads are suspended in filtered water. The beads should be pre-washed in sterile filtered water to avoid any impact in downstream applications. The suspension media can be replaced with your own buffer/storage media. The beads are compatible with typical organic solvents like ethanol or isopropanol. |
Sample Preparation |
Lyse your cell, tissue, or bacterial sample via: |
Assay Procedure |
Binding |
Restrictions | For Research Use only |
Format | Liquid |
Concentration | 20 mg/mL |
Buffer | Filtered demineralized water |
Handling Advice |
Store in well closed vial and in upright position to prevent drying of the beads, this may result in a decrease of activity. Do not freeze the product! Vortex well before use. Wash the beads to remove preservatives that could interfere with your application. For washing, use the same volume as initially taken from the MagSi-STA vial or more. |
Storage | 4 °C |
Expiry Date | 12 months |